Index

A

add_edge() (neko.core.network.Network method), [1]

add_node() (neko.core.network.Network method), [1]

B

bfs_algorithm() (neko.core.network.Network method)

C

check_node() (neko.core.network.Network method) check_nodes() (neko.core.network.Network method) complete_connection() (neko.core.network.Network method), [1] connect_as_atopo() (neko.core.network.Network method) connect_component() (neko.core.network.Network method), [1] connect_genes_to_phenotype() (neko.core.network.Network method), [1]

connect_network_radially() (neko.core.network.Network method) connect_nodes() (neko.core.network.Network method), [1] connect_subgroup() (neko.core.network.Network method), [1] connect_to_upstream_nodes() (neko.core.network.Network method), [1] convert_edgelist_into_genesymbol() (neko.core.network.Network method), [1] copy() (neko.core.network.Network method)

D

dfs_algorithm() (neko.core.network.Network method)

I

is_connected() (neko.core.network.Network method), [1]

M

modify_node_name() (neko.core.network.Network method)

N

Network (class in neko.core.network)

P

print_my_paths() (neko.core.network.Network method)

R

remove_disconnected_nodes() (neko.core.network.Network method) remove_edge() (neko.core.network.Network method) remove_node() (neko.core.network.Network method), [1]

remove_path() (neko.core.network.Network method) remove_undefined_interactions() (neko.core.network.Network method) render() (neko._visual.visualize_network.NetworkVisualizer method)

T

tissue_mapping() (neko._visual.visualize_network.NetworkVisualizer method)

V

vis_comparison() (neko._visual.visualize_network.NetworkVisualizer method)

Y

yfiles_visual() (neko._visual.visualize_network.NetworkVisualizer method)